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LOC118096509 mannose-binding protein [ Zootoca vivipara (common lizard) ]

Gene ID: 118096509, updated on 30-Nov-2023

Summary

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Gene symbol
LOC118096509
Gene description
mannose-binding protein
See related
EnsemblRapid:ENSZVIG00000021178
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
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Genomic context

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See LOC118096509 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 5 NC_083280.1 (80275228..80282323, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG14 NC_048618.1 (17408746..17415833)

Chromosome 5 - NC_083280.1Genomic Context describing neighboring genes Neighboring gene pulmonary surfactant-associated protein A2-like Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene pulmonary surfactant-associated protein D-like Neighboring gene pulmonary surfactant-associated protein D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083280.1 Reference rZooViv1.1

    Range
    80275228..80282323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060274997.1 → XP_060130980.1  mannose-binding protein isoform X2

  2. XM_035138433.2 → XP_034994324.1  mannose-binding protein isoform X1

    Related
    ENSZVIP00000029335.1
    Conserved Domains (3) summary
    pfam09006
    Location:93 → 137
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    pfam01391
    Location:32 → 89
    Collagen; Collagen triple helix repeat (20 copies)
    cl02432
    Location:130 → 242
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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