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GFRA1 GDNF family receptor alpha 1 [ Zootoca vivipara (common lizard) ]

Gene ID: 118096143, updated on 20-Mar-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
EnsemblRapid:ENSZVIG00000018340
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 5 NC_083280.1 (51761787..51940692, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG14 NC_048618.1 (45358503..45535525)

Chromosome 5 - NC_083280.1Genomic Context describing neighboring genes Neighboring gene attractin like 1 Neighboring gene uncharacterized LOC118096462 Neighboring gene uncharacterized LOC118096601 Neighboring gene protein ripply1-like Neighboring gene pancreatic lipase-related protein 2 Neighboring gene coiled-coil domain containing 172

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083280.1 Reference rZooViv1.1

    Range
    51761787..51940692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035137505.2 → XP_034993396.1  GDNF family receptor alpha-1

    Related
    ENSZVIP00000024967.1
    Conserved Domains (2) summary
    smart00907
    Location:153 → 232
    GDNF; GDNF/GAS1 domain
    pfam02351
    Location:242 → 336
    GDNF; GDNF/GAS1 domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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