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PLA2G6 phospholipase A2 group VI [ Zootoca vivipara (common lizard) ]

Gene ID: 118091247, updated on 20-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
See related
EnsemblRapid:ENSZVIG00000003645
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 10 NC_083285.1 (43775315..43803551)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG9 NC_048613.1 (42312736..42342232)

Chromosome 10 - NC_083285.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083285.1 Reference rZooViv1.1

    Range
    43775315..43803551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060279836.1 → XP_060135819.1  85/88 kDa calcium-independent phospholipase A2

  2. XM_060279839.1 → XP_060135822.1  85/88 kDa calcium-independent phospholipase A2

  3. XM_060279841.1 → XP_060135824.1  85/88 kDa calcium-independent phospholipase A2

  4. XM_060279840.1 → XP_060135823.1  85/88 kDa calcium-independent phospholipase A2

  5. XM_060279834.1 → XP_060135817.1  85/88 kDa calcium-independent phospholipase A2

  6. XM_060279835.1 → XP_060135818.1  85/88 kDa calcium-independent phospholipase A2

  7. XM_060279838.1 → XP_060135821.1  85/88 kDa calcium-independent phospholipase A2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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