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LARGE1 LARGE xylosyl- and glucuronyltransferase 1 [ Zootoca vivipara (common lizard) ]

Gene ID: 118090665, updated on 20-Mar-2024

Summary

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Gene symbol
LARGE1
Gene description
LARGE xylosyl- and glucuronyltransferase 1
See related
EnsemblRapid:ENSZVIG00000012871
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See LARGE1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 10 NC_083285.1 (46802086..47116108)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG9 NC_048613.1 (45255645..45578647)

Chromosome 10 - NC_083285.1Genomic Context describing neighboring genes Neighboring gene HMG-box containing 4 Neighboring gene intestine specific homeobox Neighboring gene collagen alpha-1(X) chain-like Neighboring gene collagen alpha-1(X) chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyl- and glucuronyltransferase LARGE1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083285.1 Reference rZooViv1.1

    Range
    46802086..47116108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035126642.2 → XP_034982533.1  xylosyl- and glucuronyltransferase LARGE1

    Conserved Domains (2) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_035126643.2 → XP_034982534.1  xylosyl- and glucuronyltransferase LARGE1

    Related
    ENSZVIP00000017417.1
    Conserved Domains (2) summary
    cd06431
    Location:138 → 417
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:473 → 742
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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