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ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [ Zootoca vivipara (common lizard) ]

Gene ID: 118090445, updated on 20-Mar-2024

Summary

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Gene symbol
ST3GAL1
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 1
See related
EnsemblRapid:ENSZVIG00000016163
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See ST3GAL1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 8 NC_083283.1 (9427466..9533702)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG8 NC_048612.1 (70431031..70535670, complement)

Chromosome 8 - NC_083283.1Genomic Context describing neighboring genes Neighboring gene zinc finger and AT-hook domain containing Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene protein NYNRIN-like Neighboring gene N-myc downstream regulated 1 Neighboring gene cellular communication network factor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083283.1 Reference rZooViv1.1

    Range
    9427466..9533702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060277600.1 → XP_060133583.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

  2. XM_035126173.2 → XP_034982064.2  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

  3. XM_060277602.1 → XP_060133585.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

  4. XM_060277601.1 → XP_060133584.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

  5. XM_060277603.1 → XP_060133586.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

  6. XM_035126174.2 → XP_034982065.2  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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