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B4GALT5 beta-1,4-galactosyltransferase 5 [ Zootoca vivipara (common lizard) ]

Gene ID: 118088344, updated on 20-Mar-2024

Summary

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Gene symbol
B4GALT5
Gene description
beta-1,4-galactosyltransferase 5
See related
EnsemblRapid:ENSZVIG00000004197
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See B4GALT5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 7 NC_083282.1 (77493461..77544638, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG7 NC_048611.1 (18208857..18260361)

Chromosome 7 - NC_083282.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily B member 1 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene prostaglandin I2 synthase Neighboring gene U2 spliceosomal RNA Neighboring gene solute carrier family 9 member A8 Neighboring gene opsin-5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083282.1 Reference rZooViv1.1

    Range
    77493461..77544638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035121895.2 → XP_034977786.1  beta-1,4-galactosyltransferase 5 isoform X1

    Related
    ENSZVIP00000005565.1
    Conserved Domains (1) summary
    cd00899
    Location:164 → 380
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_035121896.2 → XP_034977787.2  beta-1,4-galactosyltransferase 5 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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