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ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Zootoca vivipara (common lizard) ]

Gene ID: 118084731, updated on 20-Mar-2024

Summary

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Gene symbol
ST3GAL6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
EnsemblRapid:ENSZVIG00000002360
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See ST3GAL6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 4 NC_083279.1 (70523029..70571334, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG5 NC_048609.1 (30632017..30678411)

Chromosome 4 - NC_083279.1Genomic Context describing neighboring genes Neighboring gene cell cycle control protein 50C-like Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene collagen type VIII alpha 1 chain Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083279.1 Reference rZooViv1.1

    Range
    70523029..70571334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035114581.2 → XP_034970472.2  type 2 lactosamine alpha-2,3-sialyltransferase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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