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PCCA propionyl-CoA carboxylase subunit alpha [ Zootoca vivipara (common lizard) ]

Gene ID: 118084716, updated on 20-Mar-2024

Summary

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Gene symbol
PCCA
Gene description
propionyl-CoA carboxylase subunit alpha
See related
EnsemblRapid:ENSZVIG00000004218
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See PCCA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 4 NC_083279.1 (20093406..20326690)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG5 NC_048609.1 (79985316..80217310, complement)

Chromosome 4 - NC_083279.1Genomic Context describing neighboring genes Neighboring gene Zic family member 2 Neighboring gene U4 spliceosomal RNA Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene maestro heat-like repeat-containing protein family member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
propionyl-CoA carboxylase alpha chain, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083279.1 Reference rZooViv1.1

    Range
    20093406..20326690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035114548.2 → XP_034970439.2  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X2

  2. XM_035114547.2 → XP_034970438.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

    Related
    ENSZVIP00000005592.1
    Conserved Domains (1) summary
    COG4770
    Location:64 → 729
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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