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ATOH1 atonal bHLH transcription factor 1 [ Zootoca vivipara (common lizard) ]

Gene ID: 118083898, updated on 20-Mar-2024

Summary

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Gene symbol
ATOH1
Gene description
atonal bHLH transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See ATOH1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 9 NC_083284.1 (18091891..18095690)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG4 NC_048608.1 (7789531..7793064)

Chromosome 9 - NC_083284.1Genomic Context describing neighboring genes Neighboring gene glutamate receptor ionotropic, delta-2-like Neighboring gene glutamate ionotropic receptor delta type subunit 2 Neighboring gene SNF2 related chromatin remodeling ATPase with DExD box 1 Neighboring gene melanopsin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor ATOH1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083284.1 Reference rZooViv1.1

    Range
    18091891..18095690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035112926.2 → XP_034968817.1  transcription factor ATOH1

    Conserved Domains (1) summary
    cd19713
    Location:155 → 218
    bHLH_TS_ATOH1; basic helix-loop-helix (bHLH) domain found in protein atonal homolog 1 (ATOH1) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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