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LCLAT1 lysocardiolipin acyltransferase 1 [ Zootoca vivipara (common lizard) ]

Gene ID: 118083244, updated on 20-Mar-2024

Summary

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Gene symbol
LCLAT1
Gene description
lysocardiolipin acyltransferase 1
See related
EnsemblRapid:ENSZVIG00000012649
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See LCLAT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 3 NC_083278.1 (88012554..88099166)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG3 NC_048607.1 (30302895..30386927, complement)

Chromosome 3 - NC_083278.1Genomic Context describing neighboring genes Neighboring gene yippee like 5 Neighboring gene LBH regulator of WNT signaling pathway Neighboring gene uncharacterized LOC132591831 Neighboring gene calpain 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysocardiolipin acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083278.1 Reference rZooViv1.1

    Range
    88012554..88099166
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035111484.2 → XP_034967375.1  lysocardiolipin acyltransferase 1

    Related
    ENSZVIP00000017115.1
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:233 → 306
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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