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RPN1 ribophorin I [ Zootoca vivipara (common lizard) ]

Gene ID: 118080740, updated on 20-Mar-2024

Summary

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Gene symbol
RPN1
Gene description
ribophorin I
See related
EnsemblRapid:ENSZVIG00000011460
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See RPN1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 2 NC_083277.1 (41611150..41625317, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG2 NC_048606.1 (79474327..79488172)

Chromosome 2 - NC_083277.1Genomic Context describing neighboring genes Neighboring gene GATA binding protein 2 Neighboring gene fibrinogen-like protein 1 Neighboring gene RAB7A, member RAS oncogene family Neighboring gene histone H1.10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083277.1 Reference rZooViv1.1

    Range
    41611150..41625317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035106439.2 → XP_034962330.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

    Related
    ENSZVIP00000015459.1
    Conserved Domains (2) summary
    TIGR04523
    Location:523 → 621
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam04597
    Location:47 → 471
    Ribophorin_I; Ribophorin I
Nucleotide Protein
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