U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HEXD hexosaminidase D [ Zootoca vivipara (common lizard) ]

Gene ID: 118079885, updated on 20-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HEXD
Gene description
hexosaminidase D
See related
EnsemblRapid:ENSZVIG00000000466
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HEXD in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 2 NC_083277.1 (88683757..88696392, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG2 NC_048606.1 (33333148..33346826)

Chromosome 2 - NC_083277.1Genomic Context describing neighboring genes Neighboring gene nuclear prelamin A recognition factor Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene urotensin-2 receptor-like Neighboring gene urotensin 2 receptor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hexosaminidase D

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083277.1 Reference rZooViv1.1

    Range
    88683757..88696392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035104593.2 → XP_034960484.1  hexosaminidase D isoform X1

    Conserved Domains (1) summary
    cd06565
    Location:15 → 305
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  2. XM_035104596.2 → XP_034960487.1  hexosaminidase D isoform X2

    Related
    ENSZVIP00000000631.1
    Conserved Domains (1) summary
    cd06565
    Location:15 → 328
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  3. XM_035104594.2 → XP_034960485.1  hexosaminidase D isoform X1

    Related
    ENSZVIP00000000619.1
    Conserved Domains (1) summary
    cd06565
    Location:15 → 305
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases