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DYSF dysferlin [ Zootoca vivipara (common lizard) ]

Gene ID: 118079489, updated on 20-Mar-2024

Summary

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Gene symbol
DYSF
Gene description
dysferlin
See related
EnsemblRapid:ENSZVIG00000010182
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See DYSF in Genome Data Viewer
Location:
chromosome: 9
Exon count:
58
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 9 NC_083284.1 (2164831..2343034, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Unplaced Scaffold NW_023302562.1 (1149833..1283788)

Chromosome 9 - NC_083284.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 26B1 Neighboring gene U7 small nuclear RNA Neighboring gene zinc finger protein 638 Neighboring gene serine/arginine repetitive matrix protein 2 Neighboring gene uncharacterized LOC132592670

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083284.1 Reference rZooViv1.1

    Range
    2164831..2343034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060278297.1 → XP_060134280.1  dysferlin isoform X6

  2. XM_060278298.1 → XP_060134281.1  dysferlin isoform X7

  3. XM_060278292.1 → XP_060134275.1  dysferlin isoform X2

  4. XM_060278300.1 → XP_060134283.1  dysferlin isoform X9

  5. XM_060278295.1 → XP_060134278.1  dysferlin isoform X4

  6. XM_060278299.1 → XP_060134282.1  dysferlin isoform X8

  7. XM_060278294.1 → XP_060134277.1  dysferlin isoform X3

  8. XM_060278296.1 → XP_060134279.1  dysferlin isoform X5

  9. XM_060278291.1 → XP_060134274.1  dysferlin isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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