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MTMR3 myotubularin related protein 3 [ Zootoca vivipara (common lizard) ]

Gene ID: 118076414, updated on 20-Mar-2024

Summary

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Gene symbol
MTMR3
Gene description
myotubularin related protein 3
See related
EnsemblRapid:ENSZVIG00000017270
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See MTMR3 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 17 NC_083292.1 (19132703..19445119)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG17 NC_048621.1 (18472759..18528112)

Chromosome 17 - NC_083292.1Genomic Context describing neighboring genes Neighboring gene nipsnap homolog 1 Neighboring gene NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene cell death inducing DFFA like effector c Neighboring gene calcium binding protein 7 Neighboring gene cytochrome b-c1 complex subunit 9 Neighboring gene zinc finger matrin-type 5 Neighboring gene activating signal cointegrator 1 complex subunit 2 Neighboring gene acyl-CoA dehydrogenase family member 11 Neighboring gene acyl-CoA dehydrogenase family member 11-like Neighboring gene HORMA domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083292.1 Reference rZooViv1.1

    Range
    19132703..19445119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060269306.1 → XP_060125289.1  myotubularin-related protein 3 isoform X1

  2. XM_035099150.2 → XP_034955041.1  myotubularin-related protein 3 isoform X1

    Conserved Domains (3) summary
    cd15732
    Location:1119 → 1188
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  3. XM_035099156.2 → XP_034955047.1  myotubularin-related protein 3 isoform X3

    Conserved Domains (3) summary
    cl28890
    Location:1119 → 1179
    FYVE_like_SF; FYVE domain like superfamily
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  4. XM_035099155.2 → XP_034955046.1  myotubularin-related protein 3 isoform X2

    Related
    ENSZVIP00000023479.1
    Conserved Domains (3) summary
    cd15732
    Location:1119 → 1179
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  5. XM_035099158.2 → XP_034955049.1  myotubularin-related protein 3 isoform X5

    Conserved Domains (3) summary
    cl28890
    Location:1119 → 1170
    FYVE_like_SF; FYVE domain like superfamily
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  6. XM_035099160.2 → XP_034955051.1  myotubularin-related protein 3 isoform X7

    Related
    ENSZVIP00000023495.1
    Conserved Domains (3) summary
    cd15732
    Location:1082 → 1151
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  7. XM_035099161.2 → XP_034955052.1  myotubularin-related protein 3 isoform X8

    Conserved Domains (3) summary
    cd15732
    Location:1082 → 1142
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  8. XM_035099157.2 → XP_034955048.1  myotubularin-related protein 3 isoform X4

    Related
    ENSZVIP00000023486.1
    Conserved Domains (3) summary
    cd15732
    Location:1108 → 1177
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 136
    PH-like; Pleckstrin homology-like domain

  9. XM_035099159.2 → XP_034955050.1  myotubularin-related protein 3 isoform X6

    Conserved Domains (3) summary
    cd15732
    Location:1108 → 1168
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 136
    PH-like; Pleckstrin homology-like domain

  10. XM_035099162.2 → XP_034955053.1  myotubularin-related protein 3 isoform X9

    Conserved Domains (3) summary
    cd15732
    Location:1071 → 1140
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 136
    PH-like; Pleckstrin homology-like domain

  11. XM_035099163.2 → XP_034955054.1  myotubularin-related protein 3 isoform X10

    Conserved Domains (3) summary
    cd15732
    Location:1071 → 1131
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:169 → 485
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 136
    PH-like; Pleckstrin homology-like domain

  12. XM_035099153.2 → XP_034955044.1  myotubularin-related protein 3 isoform X1

    Related
    ENSZVIP00000023474.1
    Conserved Domains (3) summary
    cd15732
    Location:1119 → 1188
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain

  13. XM_035099152.2 → XP_034955043.1  myotubularin-related protein 3 isoform X1

    Conserved Domains (3) summary
    cd15732
    Location:1119 → 1188
    FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
    cd14586
    Location:180 → 496
    PTP-MTMR3; protein tyrosine phosphatase-like domain of myotubularin related phosphoinositide phosphatase 3
    cl17171
    Location:23 → 147
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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