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SLC5A1 solute carrier family 5 member 1 [ Zootoca vivipara (common lizard) ]

Gene ID: 118076084, updated on 18-Sep-2024

Summary

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Gene symbol
SLC5A1
Gene description
solute carrier family 5 member 1
See related
EnsemblRapid:ENSZVIG00000005736
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootoca vivipara
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Zootoca
Orthologs
human mouse all
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Genomic context

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See SLC5A1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_10 current rZooViv1.1 (GCF_963506605.1) 17 NC_083292.1 (15679202..15713889, complement)
100 previous assembly UG_Zviv_1 (GCF_011800845.1) Linkage Group LG17 NC_048621.1 (14711382..14746242, complement)

Chromosome 17 - NC_083292.1Genomic Context describing neighboring genes Neighboring gene RAB36, member RAS oncogene family Neighboring gene radial spoke head 14 homolog Neighboring gene G protein subunit alpha z Neighboring gene uncharacterized LOC118076159 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-glucose:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/glucose cotransporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963506605.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rZooViv1.1

Genomic

  1. NC_083292.1 Reference rZooViv1.1

    Range
    15679202..15713889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035098618.2 → XP_034954509.1  sodium/glucose cotransporter 1

    Related
    ENSZVIP00000007582.1
    Conserved Domains (1) summary
    cl00456
    Location:26 → 655
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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