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LOC118055063 UDP-arabinopyranose mutase 1-like [ Populus alba (white poplar) ]

Gene ID: 118055063, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118055063
Gene description
UDP-arabinopyranose mutase 1-like
Locus tag
D5086_0000104950
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118055063 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271569.1 (759074..762021)

NW_023271569.1Genomic Context describing neighboring genes Neighboring gene PI-PLC X domain-containing protein At5g67130-like Neighboring gene cytochrome P450 85A-like Neighboring gene probable tRNA (guanine(26)-N(2))-dimethyltransferase 2 Neighboring gene small nucleolar RNA snoR83 Neighboring gene small nucleolar RNA snoR83

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271569 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1-like
Names
type IIIa membrane protein cp-wap13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271569.1 Reference ASM523922v1 Primary Assembly

    Range
    759074..762021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035066857.1 → XP_034922748.1  UDP-arabinopyranose mutase 1-like

    UniProtKB/TrEMBL
    A0A4U5QCQ8
    Conserved Domains (1) summary
    PLN03180
    Location:10 → 354
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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