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LOC118051764 cellulose synthase A catalytic subunit 3 [UDP-forming]-like [ Populus alba (white poplar) ]

Gene ID: 118051764, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118051764
Gene description
cellulose synthase A catalytic subunit 3 [UDP-forming]-like
Locus tag
D5086_0000261260
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118051764 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271074.1 (1606774..1613312, complement)

NW_023271074.1Genomic Context describing neighboring genes Neighboring gene protein SEMI-ROLLED LEAF 2-like Neighboring gene 40S ribosomal protein S2-3-like Neighboring gene polygalacturonase-like Neighboring gene probable galactinol--sucrose galactosyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271074 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 3 [UDP-forming]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271074.1 Reference ASM523922v1 Primary Assembly

    Range
    1606774..1613312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035062491.1 → XP_034918382.1  cellulose synthase A catalytic subunit 3 [UDP-forming]-like

    UniProtKB/TrEMBL
    A0A4U5NN51
    Conserved Domains (1) summary
    PLN02638
    Location:1 → 1064
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit
Nucleotide Protein
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