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LOC118034464 tRNA (guanine(26)-N(2))-dimethyltransferase [ Populus alba (white poplar) ]

Gene ID: 118034464, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118034464
Gene description
tRNA (guanine(26)-N(2))-dimethyltransferase
Locus tag
D5086_0000216200
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118034464 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023272036.1 (804700..806653)

NW_023272036.1Genomic Context describing neighboring genes Neighboring gene putative F-box protein At1g50870 Neighboring gene eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like Neighboring gene small nucleolar RNA U30 Neighboring gene RNA-binding protein 24-like Neighboring gene tRNA 2'-phosphotransferase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023272036 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: tRNA (guanine(26)-N(2))-dimethyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023272036.1 Reference ASM523922v1 Primary Assembly

    Range
    804700..806653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035039766.1 → XP_034895657.1  LOW QUALITY PROTEIN: tRNA (guanine(26)-N(2))-dimethyltransferase

    Conserved Domains (1) summary
    cl17173
    Location:49 → 260
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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