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LOC118028299 mitochondrial carnitine/acylcarnitine carrier-like protein [ Populus alba (white poplar) ]

Gene ID: 118028299, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118028299
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
D5086_0000173460
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118028299 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271862.1 (332787..335722, complement)

NW_023271862.1Genomic Context describing neighboring genes Neighboring gene abscisic acid receptor PYR1-like Neighboring gene uncharacterized LOC118028298 Neighboring gene uncharacterized LOC118028300 Neighboring gene AT-hook motif nuclear-localized protein 23-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271862 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein
Names
Mitochondrial carnitine/acylcarnitine carrier-like family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271862.1 Reference ASM523922v1 Primary Assembly

    Range
    332787..335722 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035031846.1 → XP_034887737.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A4V6A8F1
    Conserved Domains (1) summary
    pfam00153
    Location:206 → 297
    Mito_carr; Mitochondrial carrier protein

  2. XM_035031845.1 → XP_034887736.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A4V6A8F1
    Conserved Domains (1) summary
    pfam00153
    Location:206 → 297
    Mito_carr; Mitochondrial carrier protein

  3. XM_035031847.1 → XP_034887738.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A4V6A8F1
    Conserved Domains (1) summary
    pfam00153
    Location:206 → 297
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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