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LOC118027632 rhodanese-like/PpiC domain-containing protein 12, chloroplastic [ Populus alba (white poplar) ]

Gene ID: 118027632, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118027632
Gene description
rhodanese-like/PpiC domain-containing protein 12, chloroplastic
Locus tag
D5086_0000169290
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC118027632 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271847.1 (725443..730066)

NW_023271847.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At4g28010 Neighboring gene protein CLT1, chloroplastic Neighboring gene calcium-dependent protein kinase 34 Neighboring gene flavonoid 3',5'-hydroxylase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271847 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhodanese-like/PpiC domain-containing protein 12, chloroplastic
Names
rhodanese-like domain-containing family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271847.1 Reference ASM523922v1 Primary Assembly

    Range
    725443..730066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035031029.1 → XP_034886920.1  rhodanese-like/PpiC domain-containing protein 12, chloroplastic

    UniProtKB/TrEMBL
    A0A4U5PXW6
    Conserved Domains (2) summary
    cl00125
    Location:187 → 290
    RHOD; Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins ...
    cl29122
    Location:115 → 177
    Rotamase_2; PPIC-type PPIASE domain
Nucleotide Protein
Heading Accession and Version

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