U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRAPPC10 trafficking protein particle complex subunit 10 [ Mirounga leonina (Southern elephant seal) ]

Gene ID: 118026955, updated on 20-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRAPPC10
Gene description
trafficking protein particle complex subunit 10
Locus tag
GH733_016866
See related
EnsemblRapid:ENSMLOG00005010651
Gene type
protein coding
RefSeq status
MODEL
Organism
Mirounga leonina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TRAPPC10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270699.1 (2275253..2374900, complement)

NW_023270699.1Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase class 1 domain containing 3 Neighboring gene PWP2 small subunit processome component Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 3 Neighboring gene ribosomal RNA processing 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_023270699 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPPII protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
trafficking protein particle complex subunit 10
Names
trafficking protein particle complex 10

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KU_Mleo_1.0 Primary Assembly

Genomic

  1. NW_023270699.1 Reference KU_Mleo_1.0 Primary Assembly

    Range
    2275253..2374900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035030064.1 → XP_034885955.1  trafficking protein particle complex subunit 10 isoform X3

    Conserved Domains (2) summary
    pfam11817
    Location:414 → 503
    Foie-gras_1; Foie gras liver health family 1
    pfam12584
    Location:1024 → 1201
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  2. XM_035030062.1 → XP_034885953.1  trafficking protein particle complex subunit 10 isoform X1

    Related
    ENSMLOP00005015323.1, ENSMLOT00005017326.1
    Conserved Domains (2) summary
    pfam11817
    Location:459 → 548
    Foie-gras_1; Foie gras liver health family 1
    pfam12584
    Location:1069 → 1246
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  3. XM_035030063.1 → XP_034885954.1  trafficking protein particle complex subunit 10 isoform X2

    Conserved Domains (2) summary
    pfam11817
    Location:448 → 537
    Foie-gras_1; Foie gras liver health family 1
    pfam12584
    Location:1058 → 1235
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10

  4. XM_035030065.1 → XP_034885956.1  trafficking protein particle complex subunit 10 isoform X4

    Conserved Domains (2) summary
    pfam11817
    Location:270 → 359
    Foie-gras_1; Foie gras liver health family 1
    pfam12584
    Location:880 → 1057
    TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.