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A3GALT2 alpha 1,3-galactosyltransferase 2 [ Mirounga leonina (Southern elephant seal) ]

Gene ID: 118019722, updated on 20-Mar-2024

Summary

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Gene symbol
A3GALT2
Gene description
alpha 1,3-galactosyltransferase 2
Locus tag
GH733_015568
See related
EnsemblRapid:ENSMLOG00005014778
Gene type
protein coding
RefSeq status
MODEL
Organism
Mirounga leonina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
Orthologs
human mouse all
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Genomic context

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See A3GALT2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270447.1 (69185908..69206522)

NW_023270447.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118019719 Neighboring gene polyhomeotic homolog 2 Neighboring gene uncharacterized LOC118019721 Neighboring gene zinc finger protein 362 Neighboring gene tripartite motif containing 62

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023270447 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KU_Mleo_1.0 Primary Assembly

Genomic

  1. NW_023270447.1 Reference KU_Mleo_1.0 Primary Assembly

    Range
    69185908..69206522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035019167.1 → XP_034875058.1  alpha-1,3-galactosyltransferase 2

    Related
    ENSMLOP00005021340.1, ENSMLOT00005024074.1
    Conserved Domains (1) summary
    cd02515
    Location:68 → 339
    Glyco_transf_6; Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens
Nucleotide Protein
Heading Accession and Version

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