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ZBTB6 zinc finger and BTB domain containing 6 [ Mirounga leonina (Southern elephant seal) ]

Gene ID: 118017708, updated on 20-Mar-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Mirounga leonina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270433.1 (11821053..11840222)

NW_023270433.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene G protein-coupled receptor 21 Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene olfactory receptor 1L8-like Neighboring gene phosducin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023270433 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KU_Mleo_1.0 Primary Assembly

Genomic

  1. NW_023270433.1 Reference KU_Mleo_1.0 Primary Assembly

    Range
    11821053..11840222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035015861.1 → XP_034871752.1  zinc finger and BTB domain-containing protein 6

    Conserved Domains (5) summary
    sd00017
    Location:327 → 347
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:325 → 347
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:339 → 363
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:330 → 400
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_035015859.1 → XP_034871750.1  zinc finger and BTB domain-containing protein 6

    Conserved Domains (5) summary
    sd00017
    Location:327 → 347
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:325 → 347
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:339 → 363
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:330 → 400
    zf-C2H2_8; C2H2-type zinc ribbon

  3. XM_035015862.1 → XP_034871753.1  zinc finger and BTB domain-containing protein 6

    Conserved Domains (5) summary
    sd00017
    Location:327 → 347
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:325 → 347
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:339 → 363
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:330 → 400
    zf-C2H2_8; C2H2-type zinc ribbon

  4. XM_035015860.1 → XP_034871751.1  zinc finger and BTB domain-containing protein 6

    Conserved Domains (5) summary
    sd00017
    Location:327 → 347
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18197
    Location:8 → 123
    BTB_POZ_ZBTB6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 6 (ZBTB6)
    pfam00096
    Location:325 → 347
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:339 → 363
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:330 → 400
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
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