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A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Mirounga leonina (Southern elephant seal) ]

Gene ID: 117998600, updated on 19-Mar-2024

Summary

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Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
Locus tag
GH733_017491
Gene type
protein coding
RefSeq status
MODEL
Organism
Mirounga leonina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
Orthologs
human mouse all
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Genomic context

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See A4GALT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270739.1 (3198914..3202610)

NW_023270739.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene ARF GTPase activating protein 3 Neighboring gene uncharacterized LOC117998601 Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene U12 minor spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023270739 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KU_Mleo_1.0 Primary Assembly

Genomic

  1. NW_023270739.1 Reference KU_Mleo_1.0 Primary Assembly

    Range
    3198914..3202610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034987361.1 → XP_034843252.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:94 → 214
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:227 → 349
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region

  2. XM_034987362.1 → XP_034843253.1  lactosylceramide 4-alpha-galactosyltransferase

    Conserved Domains (2) summary
    pfam04488
    Location:94 → 214
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:227 → 349
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

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