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KPTN kaptin, actin binding protein [ Mirounga leonina (Southern elephant seal) ]

Gene ID: 117998203, updated on 19-Mar-2024

Summary

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Gene symbol
KPTN
Gene description
kaptin, actin binding protein
Locus tag
GH733_017043
See related
EnsemblRapid:ENSMLOG00005015043
Gene type
protein coding
RefSeq status
MODEL
Organism
Mirounga leonina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Mirounga
Orthologs
human mouse all
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Genomic context

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See KPTN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current KU_Mleo_1.0 (GCF_011800145.1) Unplaced Scaffold NW_023270718.1 (3680031..3687797, complement)

NW_023270718.1Genomic Context describing neighboring genes Neighboring gene Meis homeobox 3 Neighboring gene solute carrier family 8 member A2 Neighboring gene NSF attachment protein alpha Neighboring gene zinc finger protein 541

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023270718 Unplaced Scaffold Reference KU_Mleo_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mirounga leonina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KU_Mleo_1.0 Primary Assembly

Genomic

  1. NW_023270718.1 Reference KU_Mleo_1.0 Primary Assembly

    Range
    3680031..3687797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034986876.1 → XP_034842767.1  KICSTOR complex protein kaptin isoform X3

    Conserved Domains (1) summary
    pfam13517
    Location:272 → 339
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  2. XM_034986874.1 → XP_034842765.1  KICSTOR complex protein kaptin isoform X1

    Conserved Domains (1) summary
    pfam13517
    Location:322 → 389
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  3. XM_034986875.1 → XP_034842766.1  KICSTOR complex protein kaptin isoform X2

    Related
    ENSMLOP00005021775.1, ENSMLOT00005024567.1
    Conserved Domains (1) summary
    pfam13517
    Location:316 → 383
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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