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CERS1 ceramide synthase 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 117974228, updated on 6-Jun-2024

Summary

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Gene symbol
CERS1
Gene description
ceramide synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CERS1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 20 NC_073269.2 (23731595..23758078, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 19 NC_073268.1 (22737809..22764286, complement)

Chromosome 20 - NC_073269.2Genomic Context describing neighboring genes Neighboring gene cartilage oligomeric matrix protein Neighboring gene UPF1 RNA helicase and ATPase Neighboring gene COPI coat complex subunit epsilon Neighboring gene DEAD-box helicase 49

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073269.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    23731595..23758078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034945603.4 → XP_034801494.1  ceramide synthase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2R9BAG0
    Conserved Domains (1) summary
    smart00724
    Location:98 → 311
    TLC; TRAM, LAG1 and CLN8 homology domains

  2. XM_034945604.4 → XP_034801495.1  ceramide synthase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2R9BAG0, A0A2R9BE75
    Conserved Domains (1) summary
    smart00724
    Location:1 → 213
    TLC; TRAM, LAG1 and CLN8 homology domains

  3. XM_055104179.3 → XP_054960154.1  ceramide synthase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2R9BAG0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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