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LOC117965948 tyrosine-protein phosphatase non-receptor type 7-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117965948, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117965948
Gene description
tyrosine-protein phosphatase non-receptor type 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117965948 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 29 NC_081217.1 (16808979..16823142)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 37 NC_048359.1 (4521054..4535339)

Chromosome 29 - NC_081217.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP5-like Neighboring gene uncharacterized LOC131702137 Neighboring gene ADP-ribosylation factor-like protein 8A Neighboring gene G-protein coupled receptor 37-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081217.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    16808979..16823142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034911073.2 → XP_034766964.1  tyrosine-protein phosphatase non-receptor type 7-like

    Conserved Domains (1) summary
    cl28904
    Location:106 → 350
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_034911075.2 → XP_034766966.1  tyrosine-protein phosphatase non-receptor type 7-like

    Conserved Domains (1) summary
    cl28904
    Location:106 → 350
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_034911074.2 → XP_034766965.1  tyrosine-protein phosphatase non-receptor type 7-like

    Conserved Domains (1) summary
    cl28904
    Location:106 → 350
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
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