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LOC117964080 ruvB-like 1 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117964080, updated on 25-Jan-2024

Summary

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Gene symbol
LOC117964080
Gene description
ruvB-like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117964080 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 16 NC_081204.1 (1024834..1036171, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 25 NC_048347.1 (25496905..25506822)

Chromosome 16 - NC_081204.1Genomic Context describing neighboring genes Neighboring gene interleukin-17 receptor E-like Neighboring gene peregrin-like Neighboring gene eukaryotic elongation factor, selenocysteine-tRNA-specific Neighboring gene GATA-binding factor 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of R2TP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ruvB-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081204.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    1024834..1036171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058988283.1 → XP_058844266.1  ruvB-like 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases