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Gm48551 predicted gene, 48551 [ Mus musculus (house mouse) ]

Gene ID: 117934533, updated on 17-Aug-2024

Summary

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Official Symbol
Gm48551provided by MGI
Official Full Name
predicted gene, 48551provided by MGI
Primary source
MGI:MGI:6098103
See related
Ensembl:ENSMUSG00000113262 AllianceGenome:MGI:6098103
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
This locus represents naturally occurring readthrough transcription between the neighboring Dohh (deoxyhypusine hydroxylase/monooxygenase) and Gm48552 genes on chromosome 10. The readthrough transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is unlikely to produce a protein product. [provided by RefSeq, Jun 2020]
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Genomic context

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See Gm48551 in Genome Data Viewer
Location:
10 C1; 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (81220268..81227389)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (81384434..81391555)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene tektin bundle interacting protein 1 Neighboring gene fizzy and cell division cycle 20 related 1 Neighboring gene STARR-seq mESC enhancer starr_27331 Neighboring gene STARR-seq mESC enhancer starr_27332 Neighboring gene microRNA 6913 Neighboring gene deoxyhypusine hydroxylase/monooxygenase Neighboring gene predicted gene, 48552 Neighboring gene small integral membrane protein 24 Neighboring gene nuclear factor I/C Neighboring gene predicted gene 16104

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Dohh-Gm48552 readthrough

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168929.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC155937
    Related
    ENSMUST00000144647.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    81220268..81227389
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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