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LOC117933409 phosphoglycerate mutase-like protein AT74 [ Vitis riparia (riverbank grape) ]

Gene ID: 117933409, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117933409
Gene description
phosphoglycerate mutase-like protein AT74
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC117933409 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 2 NC_048432.1 (19475903..19480096)

Chromosome 2 - NC_048432.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117932284 Neighboring gene homeobox protein BEL1 homolog Neighboring gene uncharacterized LOC117933364 Neighboring gene BTB/POZ domain-containing protein At1g63850

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048432.1 Chromosome 2 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglycerate mutase-like protein AT74

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048432.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    19475903..19480096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034854771.1 → XP_034710662.1  phosphoglycerate mutase-like protein AT74

    Conserved Domains (1) summary
    pfam00300
    Location:73 → 287
    His_Phos_1; Histidine phosphatase superfamily (branch 1)
Nucleotide Protein
Heading Accession and Version

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