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LOC117915329 protein GAMETE EXPRESSED 2 [ Vitis riparia (riverbank grape) ]

Gene ID: 117915329, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117915329
Gene description
protein GAMETE EXPRESSED 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC117915329 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 5 NC_048435.1 (279971..291891)

Chromosome 5 - NC_048435.1Genomic Context describing neighboring genes Neighboring gene lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial Neighboring gene 60S ribosomal protein L18-2 Neighboring gene probable acylpyruvase FAHD1, mitochondrial Neighboring gene epoxide hydrolase A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048435.1 Chromosome 5 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pollen sperm cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein GAMETE EXPRESSED 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048435.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    279971..291891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034830875.1 → XP_034686766.1  protein GAMETE EXPRESSED 2

    Conserved Domains (2) summary
    pfam17963
    Location:616 → 689
    Big_9; Bacterial Ig domain
    cl27659
    Location:552 → 605
    Filamin; Filamin/ABP280 repeat
Nucleotide Protein
Heading Accession and Version

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