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LOC117913439 methyltransferase-like protein 23 [ Vitis riparia (riverbank grape) ]

Gene ID: 117913439, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117913439
Gene description
methyltransferase-like protein 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC117913439 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 4 NC_048434.1 (21090329..21095260)

Chromosome 4 - NC_048434.1Genomic Context describing neighboring genes Neighboring gene la-related protein 1C Neighboring gene uncharacterized LOC117912044 Neighboring gene peroxidase 64-like Neighboring gene pre-rRNA-processing protein ESF1 Neighboring gene aspartyl protease family protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048434.1 Chromosome 4 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048434.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    21090329..21095260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034828419.1 → XP_034684310.1  methyltransferase-like protein 23 isoform X2

  2. XM_034828418.1 → XP_034684309.1  methyltransferase-like protein 23 isoform X1

    Conserved Domains (1) summary
    cl17173
    Location:40 → 185
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_034828416.1 → XP_034684307.1  methyltransferase-like protein 23 isoform X1

    Conserved Domains (1) summary
    cl17173
    Location:40 → 185
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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