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LOC117906107 anthocyanidin 3-O-glucosyltransferase 5-like [ Vitis riparia (riverbank grape) ]

Gene ID: 117906107, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117906107
Gene description
anthocyanidin 3-O-glucosyltransferase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC117906107 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 18 NC_048448.1 (10480944..10482757)

Chromosome 18 - NC_048448.1Genomic Context describing neighboring genes Neighboring gene protein BRASSINAZOLE-RESISTANT 1-like Neighboring gene DNA-3-methyladenine glycosylase 1 Neighboring gene peroxisomal membrane protein 11A-like Neighboring gene anthocyanidin 3-O-glucosyltransferase 5-like Neighboring gene peroxisomal membrane protein 11A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048448.1 Chromosome 18 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthocyanidin 3-O-glucosyltransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048448.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    10480944..10482757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034819057.1 → XP_034674948.1  anthocyanidin 3-O-glucosyltransferase 5-like

    Conserved Domains (1) summary
    cl10013
    Location:8 → 468
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

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