U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117904801 probable galacturonosyltransferase 11 [ Vitis riparia (riverbank grape) ]

Gene ID: 117904801, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117904801
Gene description
probable galacturonosyltransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117904801 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 17 NC_048447.1 (14577467..14590785)

Chromosome 17 - NC_048447.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117905110 Neighboring gene ADP,ATP carrier protein ER-ANT1 Neighboring gene flavonol sulfotransferase-like Neighboring gene flavonol 4'-sulfotransferase-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_048447.1 Chromosome 17 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable galacturonosyltransferase 11

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048447.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    14577467..14590785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034817564.1 → XP_034673455.1  probable galacturonosyltransferase 11

    Conserved Domains (1) summary
    PLN02742
    Location:1 → 535
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases