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MAP2K6 mitogen-activated protein kinase kinase 6 [ Trachemys scripta elegans ]

Gene ID: 117887377, updated on 19-Mar-2024

Summary

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Gene symbol
MAP2K6
Gene description
mitogen-activated protein kinase kinase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See MAP2K6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
13
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 14 NC_048311.1 (29485368..29562274)

Chromosome 14 - NC_048311.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117887073 Neighboring gene ATP binding cassette subfamily A member 5 Neighboring gene potassium inwardly rectifying channel subfamily J member 16 Neighboring gene potassium inwardly rectifying channel subfamily J member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048311.1 Chromosome 14 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP kinase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity mitogen-activated protein kinase kinase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048311.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    29485368..29562274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034789935.1 → XP_034645826.1  dual specificity mitogen-activated protein kinase kinase 6 isoform X2

    Conserved Domains (1) summary
    cd06617
    Location:51 → 333
    PKc_MKK3_6; Catalytic domain of the dual-specificity Protein Kinases, Mitogen-activated protein Kinase Kinases 3 and 6

  2. XM_034789934.1 → XP_034645825.1  dual specificity mitogen-activated protein kinase kinase 6 isoform X1

Nucleotide Protein
Heading Accession and Version

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