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LRP2 LDL receptor related protein 2 [ Trachemys scripta elegans ]

Gene ID: 117884845, updated on 19-Mar-2024

Summary

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Gene symbol
LRP2
Gene description
LDL receptor related protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See LRP2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
80
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 11 NC_048308.1 (36033041..36220700, complement)

Chromosome 11 - NC_048308.1Genomic Context describing neighboring genes Neighboring gene retinol dehydrogenase 7-like Neighboring gene dehydrogenase/reductase 9 Neighboring gene ATP synthase F1 subunit beta Neighboring gene collagen alpha-1(XXVIII) chain-like Neighboring gene uncharacterized LOC117884698

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048308.1 Chromosome 11 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low-density lipoprotein receptor-related protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048308.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    36033041..36220700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034785710.1 → XP_034641601.1  low-density lipoprotein receptor-related protein 2 isoform X3

  2. XM_034785709.1 → XP_034641600.1  low-density lipoprotein receptor-related protein 2 isoform X2

  3. XM_034785708.1 → XP_034641599.1  low-density lipoprotein receptor-related protein 2 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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