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SLC25A29 solute carrier family 25 member 29 [ Trachemys scripta elegans ]

Gene ID: 117876145, updated on 19-Mar-2024

Summary

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Gene symbol
SLC25A29
Gene description
solute carrier family 25 member 29
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See SLC25A29 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 4 NC_048301.1 (23992306..24007396)

Chromosome 4 - NC_048301.1Genomic Context describing neighboring genes Neighboring gene tryptophanyl-tRNA synthetase 1 Neighboring gene solute carrier family 25 member 47 Neighboring gene YY1 transcription factor Neighboring gene delta 4-desaturase, sphingolipid 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048301.1 Chromosome 4 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048301.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    23992306..24007396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034767984.1 → XP_034623875.1  mitochondrial basic amino acids transporter isoform X2

  2. XM_034767983.1 → XP_034623874.1  mitochondrial basic amino acids transporter isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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