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ACSBG2 acyl-CoA synthetase bubblegum family member 2 [ Trachemys scripta elegans ]

Gene ID: 117868863, updated on 19-Mar-2024

Summary

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Gene symbol
ACSBG2
Gene description
acyl-CoA synthetase bubblegum family member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See ACSBG2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
18
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 22 NC_048319.1 (9400043..9447215)

Chromosome 22 - NC_048319.1Genomic Context describing neighboring genes Neighboring gene regulatory factor X2 Neighboring gene uncharacterized LOC117868745 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene alkaline ceramidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048319.1 Chromosome 22 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase ACSBG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048319.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    9400043..9447215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034755215.1 → XP_034611106.1  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X3

  2. XM_034755216.1 → XP_034611107.1  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X4

  3. XM_034755211.1 → XP_034611102.1  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X1

  4. XM_034755212.1 → XP_034611103.1  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X2

  5. XM_034755213.1 → XP_034611104.1  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X2

  6. XM_034755214.1 → XP_034611105.1  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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