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CREB3L3 cAMP responsive element binding protein 3 like 3 [ Trachemys scripta elegans ]

Gene ID: 117868753, updated on 19-Mar-2024

Summary

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Gene symbol
CREB3L3
Gene description
cAMP responsive element binding protein 3 like 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See CREB3L3 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
10
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 22 NC_048319.1 (8639162..8652439, complement)

Chromosome 22 - NC_048319.1Genomic Context describing neighboring genes Neighboring gene sirtuin 6 Neighboring gene relaxin-3 receptor 1-like Neighboring gene mitogen-activated protein kinase kinase 2 Neighboring gene zinc finger and BTB domain containing 7A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048319.1 Chromosome 22 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-responsive element-binding protein 3-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048319.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    8639162..8652439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034754946.1 → XP_034610837.1  cyclic AMP-responsive element-binding protein 3-like protein 3 isoform X2

  2. XM_034754947.1 → XP_034610838.1  cyclic AMP-responsive element-binding protein 3-like protein 3 isoform X3

  3. XM_034754944.1 → XP_034610835.1  cyclic AMP-responsive element-binding protein 3-like protein 3 isoform X1

  4. XM_034754945.1 → XP_034610836.1  cyclic AMP-responsive element-binding protein 3-like protein 3 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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