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XKR8 XK related 8 [ Trachemys scripta elegans ]

Gene ID: 117868135, updated on 19-Mar-2024

Summary

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Gene symbol
XKR8
Gene description
XK related 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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See XKR8 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 20 NC_048317.1 (18293450..18300591)

Chromosome 20 - NC_048317.1Genomic Context describing neighboring genes Neighboring gene replication protein A2 Neighboring gene sphingomyelin phosphodiesterase acid like 3B Neighboring gene EYA transcriptional coactivator and phosphatase 3 Neighboring gene platelet activating factor receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048317.1 Chromosome 20 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048317.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    18293450..18300591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034753755.1 → XP_034609646.1  XK-related protein 8

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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