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LOC117840979 methyltransferase-like protein 23 [ Setaria viridis ]

Gene ID: 117840979, updated on 24-Apr-2024

Summary

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Gene symbol
LOC117840979
Gene description
methyltransferase-like protein 23
Locus tag
SEVIR_1G109900v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria viridis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC117840979 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Setaria_viridis_v2.0 (GCF_005286985.1) 1 NC_048263.1 (9514719..9517540, complement)

Chromosome 1 - NC_048263.1Genomic Context describing neighboring genes Neighboring gene transcription factor TDR-like Neighboring gene protein Abitram Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene phospholipase D delta-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048263.1 Chromosome 1 Reference Setaria_viridis_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methyltransferase-like protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria viridis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_viridis_v2.0 Primary Assembly

Genomic

  1. NC_048263.1 Reference Setaria_viridis_v2.0 Primary Assembly

    Range
    9514719..9517540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034721540.1 → XP_034577431.1  methyltransferase-like protein 23

    UniProtKB/TrEMBL
    A0A4U6W7E8
Nucleotide Protein
Heading Accession and Version

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