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kirrel1b kirre like nephrin family adhesion molecule 1b [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117778443, updated on 19-Mar-2024

Summary

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Gene symbol
kirrel1b
Gene description
kirre like nephrin family adhesion molecule 1b
See related
EnsemblRapid:ENSHHIG00000001539
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See kirrel1b in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 17 NC_047167.1 (21110391..21183102, complement)

Chromosome 17 - NC_047167.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117778444 Neighboring gene CD48 antigen-like Neighboring gene uncharacterized LOC117778451 Neighboring gene cell adhesion molecule 3 Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047167.1 Chromosome 17 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047167.1 Reference fHipHip1.pri Primary Assembly

    Range
    21110391..21183102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034613991.1 → XP_034469882.1  kin of IRRE-like protein 1b isoform X2

    Related
    ENSHHIP00000003503.1, ENSHHIT00000003767.1

  2. XM_034613990.1 → XP_034469881.1  kin of IRRE-like protein 1b isoform X1

    Related
    ENSHHIP00000003505.1, ENSHHIT00000003769.1
Nucleotide Protein
Heading Accession and Version

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