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LOC117777872 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117777872, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117777872
Gene description
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like
See related
EnsemblRapid:ENSHHIG00000020019
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC117777872 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 17 NC_047167.1 (9723671..9774281, complement)

Chromosome 17 - NC_047167.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117778766 Neighboring gene prostaglandin E receptor 4 (subtype EP4) c Neighboring gene lysine-specific demethylase 4A-like Neighboring gene abhydrolase domain containing 8a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047167.1 Chromosome 17 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047167.1 Reference fHipHip1.pri Primary Assembly

    Range
    9723671..9774281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034612920.1 → XP_034468811.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:123 → 388
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_034612919.1 → XP_034468810.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:123 → 388
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_034612918.1 → XP_034468809.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:123 → 388
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_034612922.1 → XP_034468813.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X3

    Related
    ENSHHIP00000055377.1, ENSHHIT00000057001.1
    Conserved Domains (1) summary
    pfam00777
    Location:88 → 353
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_034612921.1 → XP_034468812.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X2

    Related
    ENSHHIP00000055376.1, ENSHHIT00000057000.1
    Conserved Domains (1) summary
    pfam00777
    Location:102 → 367
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_034612917.1 → XP_034468808.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

    Related
    ENSHHIP00000055375.1, ENSHHIT00000056999.1
    Conserved Domains (1) summary
    pfam00777
    Location:123 → 388
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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