U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:dkey-199f5.8 beta-1,4-galactosyltransferase 3 [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117777312, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
si:dkey-199f5.8
Gene description
beta-1,4-galactosyltransferase 3
See related
EnsemblRapid:ENSHHIG00000008707
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See si:dkey-199f5.8 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 16 NC_047166.1 (5132514..5146477)

Chromosome 16 - NC_047166.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117777218 Neighboring gene proteasome 26S subunit, ATPase 4 Neighboring gene testis-specific serine/threonine-protein kinase 1 Neighboring gene lipolysis stimulated lipoprotein receptor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047166.1 Chromosome 16 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4-galactosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047166.1 Reference fHipHip1.pri Primary Assembly

    Range
    5132514..5146477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034612002.1 → XP_034467893.1  beta-1,4-galactosyltransferase 3

    Conserved Domains (1) summary
    cd00899
    Location:129 → 347
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_034612003.1 → XP_034467894.1  beta-1,4-galactosyltransferase 3

    Related
    ENSHHIP00000023415.1, ENSHHIT00000023825.1
    Conserved Domains (1) summary
    cd00899
    Location:129 → 347
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases