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stt3a STT3 oligosaccharyltransferase complex catalytic subunit A [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117774959, updated on 19-Mar-2024

Summary

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Gene symbol
stt3a
Gene description
STT3 oligosaccharyltransferase complex catalytic subunit A
See related
EnsemblRapid:ENSHHIG00000000515
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See stt3a in Genome Data Viewer
Location:
chromosome: 14
Exon count:
19
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 14 NC_047164.1 (20940447..20951628, complement)

Chromosome 14 - NC_047164.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:dkey-250d21.1 Neighboring gene THAP domain containing 12a Neighboring gene cytoskeleton-associated protein 2 Neighboring gene EI24 autophagy associated transmembrane protein Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047164.1 Chromosome 14 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in post-translational protein modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047164.1 Reference fHipHip1.pri Primary Assembly

    Range
    20940447..20951628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034607714.1 → XP_034463605.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    Related
    ENSHHIP00000001083.1, ENSHHIT00000001189.1
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit

  2. XM_034607716.1 → XP_034463607.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    Related
    ENSHHIP00000001082.1, ENSHHIT00000001188.1
    Conserved Domains (1) summary
    pfam02516
    Location:17 → 484
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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