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mmadhca metabolism of cobalamin associated Da [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117774928, updated on 19-Mar-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
EnsemblRapid:ENSHHIG00000004998
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 2 NC_047152.1 (7606425..7609232)

Chromosome 2 - NC_047152.1Genomic Context describing neighboring genes Neighboring gene zinc finger, RAN-binding domain containing 3 Neighboring gene R3H domain-containing protein 1 Neighboring gene Rho family GTPase 3a Neighboring gene uncharacterized LOC117775177 Neighboring gene ly6/PLAUR domain-containing protein 6-like Neighboring gene paraspeckle component 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047152.1 Chromosome 2 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047152.1 Reference fHipHip1.pri Primary Assembly

    Range
    7606425..7609232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034607656.1 → XP_034463547.1  metabolism of cobalamin associated Da

    Conserved Domains (1) summary
    pfam10229
    Location:27 → 291
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_034607646.1 → XP_034463537.1  metabolism of cobalamin associated Da

    Related
    ENSHHIP00000012555.1, ENSHHIT00000012852.1
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 291
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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