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LOC117772088 matrix metalloproteinase-17-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117772088, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117772088
Gene description
matrix metalloproteinase-17-like
See related
EnsemblRapid:ENSHHIG00000012796
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC117772088 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 12 NC_047162.1 (14863710..14919498, complement)

Chromosome 12 - NC_047162.1Genomic Context describing neighboring genes Neighboring gene T-box-containing protein TBX6L-like Neighboring gene v-crk avian sarcoma virus CT10 oncogene homolog-like Neighboring gene syntaxin-2-like Neighboring gene phosphoglycerate mutase 2 (muscle)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047162.1 Chromosome 12 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-17-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047162.1 Reference fHipHip1.pri Primary Assembly

    Range
    14863710..14919498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034603031.1 → XP_034458922.1  matrix metalloproteinase-17-like

    Related
    ENSHHIP00000035435.1, ENSHHIT00000035859.1
Nucleotide Protein
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