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crkl v-crk avian sarcoma virus CT10 oncogene homolog-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117771643, updated on 19-Mar-2024

Summary

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Gene symbol
crkl
Gene description
v-crk avian sarcoma virus CT10 oncogene homolog-like
See related
EnsemblRapid:ENSHHIG00000012792
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See crkl in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 12 NC_047162.1 (14839811..14850127)

Chromosome 12 - NC_047162.1Genomic Context describing neighboring genes Neighboring gene unc-51 like autophagy activating kinase 1 Neighboring gene coiled-coil domain containing 74B Neighboring gene T-box-containing protein TBX6L-like Neighboring gene matrix metalloproteinase-17-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047162.1 Chromosome 12 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
crk-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047162.1 Reference fHipHip1.pri Primary Assembly

    Range
    14839811..14850127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034602246.1 → XP_034458137.1  crk-like protein

    Related
    ENSHHIP00000035425.1, ENSHHIT00000035849.1
    Conserved Domains (3) summary
    cd09926
    Location:5 → 105
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:123 → 177
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cl17036
    Location:239 → 295
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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