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ulk1b unc-51 like autophagy activating kinase 1 [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117771635, updated on 19-Mar-2024

Summary

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Gene symbol
ulk1b
Gene description
unc-51 like autophagy activating kinase 1
See related
EnsemblRapid:ENSHHIG00000013003
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See ulk1b in Genome Data Viewer
Location:
chromosome: 12
Exon count:
27
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 12 NC_047162.1 (14810060..14832455)

Chromosome 12 - NC_047162.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1C chain-like Neighboring gene matrix metallopeptidase 17a Neighboring gene coiled-coil domain containing 74B Neighboring gene v-crk avian sarcoma virus CT10 oncogene homolog-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047162.1 Chromosome 12 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autophosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase ULK1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047162.1 Reference fHipHip1.pri Primary Assembly

    Range
    14810060..14832455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034602229.1 → XP_034458120.1  serine/threonine-protein kinase ULK1 isoform X2

  2. XM_034602230.1 → XP_034458121.1  serine/threonine-protein kinase ULK1 isoform X3

  3. XM_034602228.1 → XP_034458119.1  serine/threonine-protein kinase ULK1 isoform X1

    Related
    ENSHHIP00000036083.1, ENSHHIT00000036508.1
Nucleotide Protein
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Molecular Biology Databases