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LOC117765226 host cell factor 1-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117765226, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117765226
Gene description
host cell factor 1-like
See related
EnsemblRapid:ENSHHIG00000021029
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC117765226 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
29
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 7 NC_047157.1 (26798280..26809904)

Chromosome 7 - NC_047157.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117765239 Neighboring gene methyl CpG binding protein 2 Neighboring gene interleukin-1 receptor-associated kinase 1 Neighboring gene FERM domain-containing protein 4B Neighboring gene ATP-binding cassette, sub-family D (ALD), member 1 Neighboring gene uncharacterized LOC117765248

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047157.1 Chromosome 7 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047157.1 Reference fHipHip1.pri Primary Assembly

    Range
    26798280..26809904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034591575.1 → XP_034447466.1  host cell factor 1-like isoform X1

  2. XM_034591576.1 → XP_034447467.1  host cell factor 1-like isoform X2

    Related
    ENSHHIP00000057598.1, ENSHHIT00000059542.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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